Building molecules using the Small Molecule Builder
This video shows how to build a small molecule from scratch; modifying atoms and bond orders, controlling dihedral angles, stereochemistry, and tautomeric states.
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=47&autoplay=1[label]0:47 Generating a molecule from SMILES or ID[link end]
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=70&autoplay=1[label]1:10 Building a molecule from scratch[link end]
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=85&autoplay=1[label]1:25 Building a fused ring[link end]
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=100&autoplay=1[label]1:40 Substitution based editing of atom types[link end]
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=135&autoplay=1[label]2:15 Substitution based editing of bond orders[link end]
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=196&autoplay=1[label]3:16 Selecting alternate tautomeric states[link end]
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=222&autoplay=1[label]3:42 Setting stereochemistry constraints[link end]
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=294&autoplay=1[label]4:54 Adjusting dihedral angles[link end]
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=308&autoplay=1[label]5:08 Setting ionization states of atoms[link end]
[link]video.chemcomp[d]com/watch/SxGdojMqWUG2EMYQ3awStQ?second=325&autoplay=1[label]5:25 Performing an energy minimization[link end]
