
Preparing a raw PDB file containing multiple ligands
This video shows how to prepare a raw PDB file containing more than 1 ligand for use in MOE for tasks such as interactive analysis or Docking.
0:27 Opening a raw PDB file
1:18 Inspecting contents of the PDB file using the System Manager
2:22 Selecting the primary ligand using Choose Ligand
3:00 Structure preparation with QuickPrep
3:22 Review of Quick Prep steps
5:25 Inspecting atom sets corrected during Quick Prep
5:38 Viewing the active site using Site View