CCG Video Library

From Structure to Dynamics Simulation: Running & Visualizing MD Trajectories

Setting up a Molecular Dynamics simulation starting from a protein PDB structure can be challenging. It involves: data preparation, force field parameterization, running protocols, and trajectory analysis/visualization. MOE provides a streamlined interface which allows for easy setup, execution, and visualization of MD trajectories via AMBER, NAMD, or the internal MD engine. In this webinar, the complete workflow to run MD simulations is introduced.

Airdate: December 9, 2020