Superposing Proteins on Structural Motifs
This video shows how to superpose two or more proteins where there is a reasonable degree of secondary structure similarity, but sequence similarity is poor.
[link]video.chemcomp[d]com/watch/TBuZv3jhytVKynoF2bhCCS?second=75&autoplay=1[label]1:25 Launching and customizing the Sequence Editor[link end]
[link]video.chemcomp[d]com/watch/TBuZv3jhytVKynoF2bhCCS?second=170&autoplay=1[label]2:50 Assessing similarity of two sequences using the dendrogram[link end]
[link]video.chemcomp[d]com/watch/TBuZv3jhytVKynoF2bhCCS?second=240&autoplay=1[label]4:00 Selecting residues using MOE selection language[link end]
[link]video.chemcomp[d]com/watch/TBuZv3jhytVKynoF2bhCCS?second=320&autoplay=1[label]5:20 Superposing by structure only[link end]
[link]video.chemcomp[d]com/watch/TBuZv3jhytVKynoF2bhCCS?second=380&autoplay=1[label]6:20 Exploring structural superposition options[link end]
