Building molecules using the Protein Builder
This video shows how to build a peptide from scratch; mutating residues, control backbone geometries, repacking and exploring rotamers.
[link]video.chemcomp[d]com/watch/qFyMs9KHdNc5Pn8DGSF1MP?second=50&autoplay=1[label]0:50 Building a molecule from scratch[link end]
[link]video.chemcomp[d]com/watch/qFyMs9KHdNc5Pn8DGSF1MP?second=90&autoplay=1[label]1:30 Controlling backbone geometry[link end]
[link]video.chemcomp[d]com/watch/qFyMs9KHdNc5Pn8DGSF1MP?second=102&autoplay=1[label]1:42 Appending residues to build a chain[link end]
[link]video.chemcomp[d]com/watch/qFyMs9KHdNc5Pn8DGSF1MP?second=110&autoplay=1[label]1:50 Displaying secondary structure[link end]
[link]video.chemcomp[d]com/watch/qFyMs9KHdNc5Pn8DGSF1MP?second=115&autoplay=1[label]1:55 Mutating a residue, repacking and performing an energy minimization[link end]
[link]video.chemcomp[d]com/watch/qFyMs9KHdNc5Pn8DGSF1MP?second=165&autoplay=1[label]2:45 Controlling protonation state of residues[link end]
[link]video.chemcomp[d]com/watch/qFyMs9KHdNc5Pn8DGSF1MP?second=192&autoplay=1[label]3:12 Selecting desired rotamers[link end]
[link]video.chemcomp[d]com/watch/qFyMs9KHdNc5Pn8DGSF1MP?second=210&autoplay=1[label]3:30 Adding capping groups[link end]
